STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRXCR2Glutaredoxin and cysteine rich domain containing 2. (260 aa)    
Predicted Functional Partners:
clrn2
Clarin 2.
      
 0.777
PDZD7
Uncharacterized protein.
     
 0.733
LOC101169215
Phostensin domain-containing protein.
     
 0.727
nsg2
Neuronal vesicle trafficking associated 2.
      
 0.725
minar2
UPF0258 domain-containing protein.
   
  
 0.705
elmod3
ELMO/CED-12 domain containing 3.
      
 0.698
LOC105356814
Stereocilin 1.
      
 0.690
ENSORLP00000036342
Stereocilin.
      
 0.690
fscn2
Fascin.
     
 0.671
twf1
Twinfilin actin-binding protein 1a.
     
 0.658
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.