Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
tmem8bSi:dkey-84j12.1. (803 aa)    
Predicted Functional Partners:
igdcc4
Immunoglobulin superfamily, DCC subclass, member 4.
      
 0.609
atp1b4
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
    
   0.603
ttll4
Tubulin tyrosine ligase-like family, member 4.
      
 0.580
cfdp1
Craniofacial development protein 1; May play a role during embryogenesis.
      
 0.530
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
      
 0.503
nprl3
NPR3-like, GATOR1 complex subunit.
      
 0.489
ENSORLP00000045784
Uncharacterized protein.
      
 0.489
LOC101163228
Uncharacterized protein.
      
 0.468
luc7l
LUC7-like (S. cerevisiae).
      
 0.468
usp38
Ubiquitin specific peptidase 38; Belongs to the peptidase C19 family.
      
 0.464
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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