STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ephx2AB hydrolase-1 domain-containing protein. (566 aa)    
Predicted Functional Partners:
LOC101172193
Peroxisomal biogenesis factor 5-like b.
   
 0.961
pex5
Peroxisomal biogenesis factor 5.
   
 0.961
pex5l
Peroxisomal biogenesis factor 5-like a.
   
 0.961
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.959
pex13
Peroxisomal biogenesis factor 13.
    
 0.957
fam185a
Family with sequence similarity 185 member A.
   
 
  0.956
pex14
Peroxisomal biogenesis factor 14.
   
 
  0.956
Pex2
Peroxisomal biogenesis factor 2.
   
 
  0.955
rps27a
Ribosomal protein S27a.
   
 
  0.955
cyp2p3
Cytochrome P450 2P3; Belongs to the cytochrome P450 family.
  
 0.923
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.