STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGF13Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (255 aa)    
Predicted Functional Partners:
LOC101165069
Fibroblast growth factor receptor like 1a.
    
 0.721
FGFRL1
Fibroblast growth factor receptor like 1.
    
 0.665
fgfr3
Fibroblast growth factor receptor.
    
 0.588
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
    
 
 0.538
map3k13
Mitogen-activated protein kinase kinase kinase.
      
 0.531
fgfr2
Fibroblast growth factor receptor.
    
 0.517
LOC100049521
Fibroblast growth factor receptor 4.
    
 0.517
fgfr1
Fibroblast growth factor receptor.
    
 0.517
ret
Ret proto-oncogene receptor tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.513
LOC101155126
Fibroblast growth factor receptor.
    
 0.513
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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