Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
apofApolipoprotein F. (472 aa)    
Predicted Functional Partners:
cetp
Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.
     
 0.871
os9
OS9 endoplasmic reticulum lectin.
      
 0.643
LOC101158990
Apolipoprotein Bb, tandem duplicate 2.
  
 
 0.641
c1galt1
Si:dkey-202e17.1.
 
    
 0.639
cfdp1
Craniofacial development protein 1; May play a role during embryogenesis.
      
 0.600
ccdc86
Uncharacterized protein.
      
 0.599
LOC101155454
Glycolipid transfer protein domain containing 2.
   
  
 0.582
tac3
Tachykinin 3.
      
 0.582
H2MBB3_ORYLA
Vitellogenin domain-containing protein.
   
 
 0.563
LOC101156458
Apolipoprotein Ba.
   
 
 0.563
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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