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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apofApolipoprotein F. (472 aa)    
Predicted Functional Partners:
cetp
Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.
     
 0.832
LOC101158990
Apolipoprotein Bb, tandem duplicate 2.
  
 
 0.752
LOC101156458
Apolipoprotein Ba.
   
 
 0.697
H2MBB3_ORYLA
Vitellogenin domain-containing protein.
   
 
 0.684
c1galt1
Si:dkey-202e17.1.
 
    
 0.651
pltp
Phospholipid transfer protein.
     
 0.616
LOC101155454
Glycolipid transfer protein domain containing 2.
   
  
 0.564
os9
OS9 endoplasmic reticulum lectin.
      
 0.562
LOC101170514
Zinc finger protein 385A.
      
 0.556
ccdc86
Uncharacterized protein.
      
 0.547
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.