STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157756Cytochrome b-245, beta polypeptide (chronic granulomatous disease). (565 aa)    
Predicted Functional Partners:
LOC101170577
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 0.988
ncf1
Neutrophil cytosolic factor 1.
   
 0.921
LOC101159287
Calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 2.
   
 
 0.907
LOC101168093
Protein kinase domain-containing protein.
    
 0.906
LOC101168078
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
 0.906
H2M1A0_ORYLA
Protein kinase domain-containing protein.
    
 0.906
LOC101168038
Protein kinase domain-containing protein.
    
 0.906
LOC101168285
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.906
ENSORLP00000032087
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.906
LOC101156645
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
     
  0.900
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.