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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157054Serine/threonine-protein kinase; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily. (327 aa)    
Predicted Functional Partners:
dcp1a
Decapping mRNA 1A.
    
   0.564
dcp1b
Decapping mRNA 1B.
    
   0.556
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.545
LOC101166148
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.545
tyk2
Tyrosine-protein kinase.
   
 0.508
LOC101167942
Uncharacterized protein.
    
 
 0.504
LOC101169936
Enhancer of mRNA decapping 3 homolog (S. cerevisiae).
    
 
 0.504
LOC101165238
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.
    
 0.497
LOC101166167
AMPKBI domain-containing protein.
    
 0.497
LOC101155912
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a.
    
 0.497
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.