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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158002Uncharacterized protein. (114 aa)    
Predicted Functional Partners:
LOC101160277
Dynein light chain roadblock.
   
 0.961
tctex1d2
Tctex1 domain containing 2.
  
 
 0.935
LOC101171417
Dynein light chain.
   
 0.857
LOC101162462
Dynein light chain.
   
 0.857
LOC101174042
Dynein light chain.
   
 0.857
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.852
LOC101158306
Dynein, cytoplasmic 1, intermediate chain 2b.
   
 0.849
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 0.849
dync1i2
Dynein, cytoplasmic 1, intermediate chain 2a.
   
 0.849
LOC101164165
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
    
 0.823
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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