Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
LOC101155165Protein phosphatase 1, regulatory subunit 27b. (167 aa)    
Predicted Functional Partners:
LOC101164281
Protein disulfide-isomerase.
    
 0.724
LOC101169945
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.537
LOC101171445
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.537
LOC101158483
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.537
LOC101155811
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.537
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.537
LOC101165241
Protein disulfide-isomerase.
    
 0.488
ndufa3
NADH:ubiquinone oxidoreductase subunit A3.
      
 0.464
pskh1
Protein serine kinase H1; Belongs to the protein kinase superfamily.
    
 
 0.453
sirt7
Sirtuin 7.
    
 0.446
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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