Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165461Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2214 aa)    
Predicted Functional Partners:
LOC101155194
Uncharacterized protein.
    
 0.628
RHOB
Ras homolog family member B.
    
 0.628
LOC101173444
Uncharacterized protein.
    
 0.628
LOC101158607
Uncharacterized protein.
    
 0.628
LOC101160539
Uncharacterized protein.
    
 0.628
LOC101167618
Uncharacterized protein.
    
 0.628
arhgap1
Uncharacterized protein.
     
 0.607
H2LP85_ORYLA
Ras homolog gene family, member Gd.
   
 0.603
LOC101162944
Ras homolog family member Gb.
   
 0.603
RND1
Rho family GTPase 1.
    
 0.598
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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