STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165461Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2214 aa)    
Predicted Functional Partners:
H2LP85_ORYLA
Ras homolog gene family, member Gd.
   
 0.683
LOC101162944
Ras homolog family member Gb.
   
 0.683
CDC42
Cell division cycle 42.
    
 0.680
LOC101164400
Uncharacterized protein.
    
 0.680
LOC105354522
Rac family small GTPase 3b.
    
 0.678
LOC101155643
Rho family GTPase 2.
    
 0.678
Rhoh
Ras homolog family member H.
    
 0.678
LOC101164658
Uncharacterized protein.
    
 0.678
LOC101155194
Uncharacterized protein.
    
 0.678
rhobtb3
Si:dkey-6b12.5.
    
 0.678
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.