Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
senp8SUMO peptidase family member, NEDD8 specific. (221 aa)    
Predicted Functional Partners:
ENSORLP00000027520
Ubiquitin-like domain-containing protein.
    
 0.987
ENSORLP00000045836
Ubiquitin-like domain-containing protein.
    
 0.987
cul1
Cullin 1b; Belongs to the cullin family.
    
 
 0.928
ireb2
Iron-responsive element binding protein 2.
  
 
 0.879
aco2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 
 0.879
aco1
Aconitase 1, soluble; Belongs to the aconitase/IPM isomerase family.
  
 
 0.879
acmsd
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). Belongs to the metallo-dependent hydrolases superfamily.
    
 0.836
pigl
Phosphatidylinositol glycan anchor biosynthesis, class L.
    
 0.835
uchl3
Ubiquitin carboxyl-terminal hydrolase.
    
 0.796
uchl1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.778
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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