Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rbmxRNA binding motif protein X-linked. (420 aa)    
Predicted Functional Partners:
LOC101167735
RRM domain-containing protein.
   
 0.991
LOC101163114
RRM domain-containing protein.
   
 0.991
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.991
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.989
LOC101167466
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.989
hnrnpu
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.966
LOC101174914
Uncharacterized protein.
  
0.962
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
  
0.961
LOC101164733
Serine and arginine rich splicing factor 9.
   
 0.889
ncbp2
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
   
 0.830
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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