STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbmxRNA binding motif protein X-linked. (420 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.966
LOC101167466
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.966
LOC101167735
RRM domain-containing protein.
   
 0.961
LOC101163114
RRM domain-containing protein.
   
 0.961
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.956
hnrnpu
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.942
LOC101174914
Uncharacterized protein.
  
0.937
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
  
0.936
YTHDC2
YTH domain containing 2.
   
 0.684
rps4x
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.673
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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