Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ppibPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (216 aa)    
Predicted Functional Partners:
crtap
Cartilage associated protein.
   
 0.957
p3h4
Prolyl 3-hydroxylase family member 4 (non-enzymatic).
   
 0.930
P3H4
Prolyl 3-hydroxylase family member 4 (non-enzymatic).
   
 0.930
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
  
 0.921
wdr19
WD repeat domain 19.
      
 0.913
LOC101167186
Methyl CpG binding protein 2.
    
   0.900
p3h1
Prolyl 3-hydroxylase 1.
   
 0.891
hspa5
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.864
pdia3
Protein disulfide-isomerase.
   
 0.848
pdia4
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
   
 0.848
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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