Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101155872Four and a half LIM domains 1b. (329 aa)    
Predicted Functional Partners:
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 
 0.808
plekhg2
Pleckstrin homology domain containing, family G (with RhoGef domain) member 2.
    
 
 0.613
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 
 0.572
LACTB2
Lactamase beta 2.
    
   0.511
dvl3
Dishevelled segment polarity protein 3a.
    
 0.475
dvl2
Dishevelled segment polarity protein 2.
    
 0.475
dvl1
Dishevelled segment polarity protein 1a.
    
 0.475
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.464
LOC101174713
Uncharacterized protein.
    
 
 0.401
ankrd22
Ankyrin repeat domain 22.
    
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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