Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101169036Nucleobindin 1. (443 aa)    
Predicted Functional Partners:
LOC101167327
FAM20C golgi associated secretory pathway kinase.
    
 0.636
LOC101163577
FAM20C golgi associated secretory pathway kinase a.
    
 0.636
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
  0.518
LOC110015368
Family with sequence similarity 20 member C, like.
    
 0.514
LOC101164404
Fam20C domain-containing protein.
    
 0.514
LOC101155694
Peptide YYa.
      
 0.472
GHRHR
Growth hormone releasing hormone receptor; Belongs to the G-protein coupled receptor 2 family.
      
 0.462
LOC101173302
Cortistatin.
      
 0.462
LOC101175408
Reticulocalbin 3, EF-hand calcium binding domain.
   
 
 0.458
rcn1
Reticulocalbin 1, EF-hand calcium binding domain.
   
 
 0.458
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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