STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
espl1Extra spindle pole bodies like 1, separase. (2165 aa)    
Predicted Functional Partners:
pttg1
Uncharacterized protein.
   
 0.999
rad21
Uncharacterized protein.
   
 0.994
smc3
Structural maintenance of chromosomes protein.
   
 0.993
LOC101173147
RAD21 cohesin complex component like 1.
   
 0.990
smc1a
Structural maintenance of chromosomes protein.
   
 0.982
rec8
REC8 meiotic recombination protein b.
   
 0.982
LOC101160447
RAN binding protein 2.
   
 
 0.979
PLK1
Serine/threonine-protein kinase PLK.
   
 0.971
cdca8
Cell division cycle associated 8.
   
 
 0.963
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 
 0.963
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.