Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101165244Info solute carrier family 35 member F2, like. (401 aa)    
Predicted Functional Partners:
H2LE29_ORYLA
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.677
retreg3
Reticulophagy regulator family member 3.
   
   0.647
pomk
Protein O-mannose kinase.
    
   0.628
SLC35D3
Solute carrier family 35 member D3.
   
  
 0.594
slc35c2
Solute carrier family 35 member C2.
      
 0.529
slc35b4
Solute carrier family 35 member B4.
      
 0.523
SLC35A4
Solute carrier family 35 member A4.
      
 0.517
atp5f1b
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.512
bicc1
BicC family RNA binding protein 1a.
      
 0.504
LOC101172590
Bicaudal C homolog 2.
      
 0.504
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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