STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2L8U7_ORYLAUncharacterized protein. (179 aa)    
Predicted Functional Partners:
rbbp5
Retinoblastoma binding protein 5.
    
 0.549
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.531
wdr6
WD repeat domain 6.
    
   0.513
ENSORLP00000037721
HECT domain-containing protein.
  
     0.486
eed
Embryonic ectoderm development protein.
   
 0.454
LOC101161131
Lysine (K)-specific demethylase 6A, like.
   
 0.445
LOC101164833
Lysine (K)-specific demethylase 6B, b.
   
 0.445
H2ME95_ORYLA
Lysine (K)-specific demethylase 6A.
   
 0.445
ENSORLP00000039316
Uncharacterized protein.
   
 0.445
LOC101160692
Lysine (K)-specific demethylase 6B, a.
   
 0.445
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.