STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emc10ER membrane protein complex subunit 10. (255 aa)    
Predicted Functional Partners:
emc6
ER membrane protein complex subunit 6.
    
 0.999
emc7
ER membrane protein complex subunit 7.
   
 0.999
emc1
ER membrane protein complex subunit 1.
   
 0.998
mmgt1
Membrane magnesium transporter 1.
    
 0.998
emc4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 0.998
emc8
ER membrane protein complex subunit 8.
    
 0.998
emc2
ER membrane protein complex subunit 2.
    
 0.998
LOC101173295
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 0.996
LOC101162909
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 0.996
H2LYK9_ORYLA
Uncharacterized protein.
     
  0.900
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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