STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coro2bCoronin; Belongs to the WD repeat coronin family. (481 aa)    
Predicted Functional Partners:
angptl3
Angiopoietin-like 3.
      
 0.679
LOC101175556
Angiopoietin-like 1a.
   
  
 0.678
fpgs
Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.
    
 0.553
ephx2
AB hydrolase-1 domain-containing protein.
    
 0.532
mocs1
Molybdenum cofactor synthesis 1.
    
 0.529
rfk
Riboflavin kinase.
  
 
 0.525
ENO2
Enolase 2.
     
 0.510
LOC101165077
Enolase 2.
     
 0.510
id2
Inhibitor of DNA binding 2a.
      
 0.508
LOC101162631
Insulin-like growth factor binding protein 1b.
      
 0.504
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.