STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
anp32aAcidic (leucine-rich) nuclear phosphoprotein 32 family, member A. (257 aa)    
Predicted Functional Partners:
LOC101172846
Histone H2A; Belongs to the histone H2A family.
   
 
 0.659
LOC101170644
H2A histone family, member Va; Belongs to the histone H2A family.
   
 
 0.659
LOC101158031
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.650
LOC101171505
SET nuclear proto-oncogene b; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.645
LOC101169699
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.562
LOC101175126
Exportin 1 (CRM1 homolog, yeast) a.
   
 0.552
LOC101170539
Exportin 1 (CRM1 homolog, yeast) b.
   
 0.552
nup214
Nup214_FG domain-containing protein.
     
 0.525
atxn1l
Ataxin 1-like.
    
 
 0.489
LOC101172398
ELAV-like protein; Belongs to the RRM elav family.
   
 0.467
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.