STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
anp32aAcidic (leucine-rich) nuclear phosphoprotein 32 family, member A. (257 aa)    
Predicted Functional Partners:
LOC101158031
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.790
LOC101171505
SET nuclear proto-oncogene b; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.762
LOC101157007
Prothymosin alpha b.
   
 
 0.758
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
  
 0.757
H2M705_ORYLA
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
  
 0.715
nxf1
Zgc:153681.
    
 
 0.704
LOC101169699
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.670
vps72
Vacuolar protein sorting 72 homolog a.
    
 
 0.666
gmps
Guanine monophosphate synthase.
   
  
 0.664
adar
Adenosine deaminase RNA specific.
      
 0.654
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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