STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EML6EMAP like 6. (1379 aa)    
Predicted Functional Partners:
mad2l1
HORMA domain-containing protein.
   
 0.683
LOC101160447
RAN binding protein 2.
   
 0.675
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.660
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.649
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.644
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.643
LOC101159038
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.642
taf10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.640
tex10
Testis expressed 10.
   
 0.636
bub3
BUB3 mitotic checkpoint protein.
   
 0.630
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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