STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EML6EMAP like 6. (1379 aa)    
Predicted Functional Partners:
LOC101160447
RAN binding protein 2.
   
 0.588
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.558
mis12
MIS12 kinetochore complex component.
     
 0.552
mad2l1
HORMA domain-containing protein.
   
 0.552
NEK9
NIMA related kinase 9.
   
  0.529
H2MFT6_ORYLA
Uncharacterized protein.
    
  0.503
bub3
BUB3 mitotic checkpoint protein.
   
 0.489
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.486
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.473
tex10
Testis expressed 10.
   
 0.462
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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