Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tex11Testis expressed 11. (910 aa)    
Predicted Functional Partners:
enosf1
Enolase superfamily member 1.
      
 0.852
ip6k1
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.846
shoc1
Uncharacterized protein.
    
 
 0.798
borcs8
BLOC-1 related complex subunit 8.
    
   0.771
ENSORLP00000044416
Uncharacterized protein.
    
 
 0.755
slc2a11
Solute carrier family 2 member 11a; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.742
LOC101156614
Solute carrier family 22 member 13b.
      
 0.728
MCMDC2
Minichromosome maintenance domain containing 2.
   
  
 0.711
spo11
SPO11 initiator of meiotic double stranded breaks.
   
  
 0.710
LOC105355271
RING-type domain-containing protein.
    
 
 0.708
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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