Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
paip1Poly(A) binding protein interacting protein 1. (451 aa)    
Predicted Functional Partners:
eif4b
Eukaryotic translation initiation factor 4Bb.
   
 0.914
eif4a3
Eukaryotic translation initiation factor 4A3.
   
 0.882
LOC101166761
Eukaryotic translation initiation factor 4eb; Belongs to the eukaryotic initiation factor 4E family.
   
 0.876
LOC100049330
Eukaryotic translation initiation factor 4ea; Belongs to the eukaryotic initiation factor 4E family.
   
 0.876
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.869
eif5
Eukaryotic translation initiation factor 5.
   
 0.843
LOC101169085
Eukaryotic translation initiation factor 4E family member 1c; Belongs to the eukaryotic initiation factor 4E family.
   
 0.840
eif4a2
Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family.
   
 0.820
LOC101155548
Eukaryotic translation initiation factor 4A1B; Belongs to the DEAD box helicase family.
   
 0.820
LOC101169122
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.812
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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