Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
aasdhAminoadipate-semialdehyde dehydrogenase. (1071 aa)    
Predicted Functional Partners:
aasdhppt
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
  
 0.977
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
   
 
 0.931
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
    
 0.913
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.836
palb2
PALB2_WD40 domain-containing protein.
  
 
 0.836
aass
Aminoadipate-semialdehyde synthase.
  
 
 0.832
LOC101170716
Carrier domain-containing protein.
  
 
 0.831
LOC101169644
Si:dkey-61p9.11.
  
 
 0.831
olpks
Carrier domain-containing protein.
  
 
 0.831
H2MEE3_ORYLA
Carrier domain-containing protein.
  
 
 0.831
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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