Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101170351Cysteine-rich hydrophobic domain 1. (174 aa)    
Predicted Functional Partners:
dlg3
Discs, large homolog 3 (Drosophila); Belongs to the MAGUK family.
      
 0.827
stub1
STIP1 homology and U-Box containing protein 1.
    
 
 0.728
wasf3
WASP family member 3b.
      
 0.702
dab2
DAB adaptor protein 2.
      
 0.696
prlr
Prolactin receptor; This is a receptor for the anterior pituitary hormone prolactin; Belongs to the type I cytokine receptor family. Type 1 subfamily.
      
 0.645
LOC101159890
FIP1 like 1b (S. cerevisiae).
      
 0.562
flt3
Fms-related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
      
 0.553
rlim
Ring finger protein, LIM domain interacting.
      
 0.530
scarb1
Scavenger receptor class B, member 1; Belongs to the CD36 family.
      
 0.528
pin4
Peptidyl-prolyl cis-trans isomerase.
      
 0.504
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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