Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
adamts6ADAM metallopeptidase with thrombospondin type 1 motif, 6. (1122 aa)    
Predicted Functional Partners:
ADAMTS20
ADAM metallopeptidase with thrombospondin type 1 motif 20.
    
0.577
dennd6b
DENN/MADD domain containing 6B.
      
 0.555
H2LJV8_ORYLA
Uncharacterized protein.
     
 0.545
adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
     
0.545
Adamtsl1
Uncharacterized protein.
     
 0.545
LOC101166699
Uncharacterized protein.
    
 0.519
LOC101174509
ADAM metallopeptidase with thrombospondin type 1 motif, 12.
    
 0.519
adamts9
ADAM metallopeptidase with thrombospondin type 1 motif, 9.
    
 0.519
c12h2orf42
Si:ch211-127d4.3.
      
 0.519
adamts18
ADAM metallopeptidase with thrombospondin type 1 motif, 18.
     
 0.503
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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