Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
slc25a43Solute carrier family 25 member 43; Belongs to the mitochondrial carrier (TC 2.A.29) family. (344 aa)    
Predicted Functional Partners:
rpl14
Ribosomal protein L14.
   
 
 0.799
rpl8
60S ribosomal protein L8.
   
 
 0.739
rpl4
Ribosomal protein L4.
   
 
 0.735
fau
40S ribosomal protein S30.
   
   0.722
rpl32
Ribosomal protein L32.
   
 
 0.716
rpl28
Ribosomal protein L28.
   
   0.706
rps18
Ribosomal protein S18.
   
 
 0.705
rpl13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.704
rps13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.703
SPRY3
Sprouty RTK signaling antagonist 3.
      
 0.694
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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