Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FILIP1LFilamin A interacting protein 1 like. (1226 aa)    
Predicted Functional Partners:
uso1
USO1 vesicle transport factor.
   
 0.732
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.723
rabggtb
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.716
trappc8
Trafficking protein particle complex 8.
    
 0.715
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.690
trappc6b
Trafficking protein particle complex 6b.
    
 0.690
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.689
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.647
trappc2
Trafficking protein particle complex 2.
    
 0.647
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.641
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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