STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL49Mitochondrial ribosomal protein L49. (173 aa)    
Predicted Functional Partners:
mrpl43
Mitochondrial ribosomal protein L43.
   
 
 0.995
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.995
dap3
Death associated protein 3.
   
 
 0.993
mrpl36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.993
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.992
mrpl15
Mitochondrial ribosomal protein L15.
   
 
 0.992
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.991
mrpl30
Mitochondrial ribosomal protein L30.
   
 
 0.990
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.989
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.989
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.