Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL49Mitochondrial ribosomal protein L49. (173 aa)    
Predicted Functional Partners:
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.994
mrpl10
Mitochondrial ribosomal protein L10.
   
 
 0.988
mrpl51
Mitochondrial ribosomal protein L51.
   
 
 0.987
mrpl43
Mitochondrial ribosomal protein L43.
   
 
 0.986
mrpl48
Mitochondrial ribosomal protein L48.
   
 
 0.983
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.982
gadd45gip1
Growth arrest and DNA-damage-inducible, gamma interacting protein 1.
   
 
 0.975
mrpl52
Mitochondrial ribosomal protein L52.
   
 
 0.975
mrpl39
Mitochondrial ribosomal protein L39.
   
 
 0.974
mrps30
Mitochondrial ribosomal protein S30.
   
 
 0.973
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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