STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppwd1Peptidylprolyl isomerase domain and WD repeat containing 1. (626 aa)    
Predicted Functional Partners:
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.991
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.989
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.987
cwc22
CWC22 spliceosome associated protein homolog.
   
  0.986
cwc25
CWC25 spliceosome associated protein homolog.
    
 0.986
slu7
SLU7 homolog, splicing factor.
    
 0.985
mtrex
Uncharacterized protein.
   
 0.984
cactin
Cactin.
    
  0.984
WDR70
WD_REPEATS_REGION domain-containing protein.
   
 0.984
ccdc12
Coiled-coil domain containing 12.
    
 0.983
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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