Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101169945Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (330 aa)    
Predicted Functional Partners:
LOC101158483
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
0.989
LOC101155811
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
0.989
rb1
Retinoblastoma 1.
   
 0.976
WDR33
WD repeat domain 33.
   
 0.969
LOC101168365
Protein phosphatase 1 regulatory subunit.
   
 0.968
LOC101174975
Protein phosphatase 1, regulatory subunit 12C.
   
 0.968
LOC101165234
PRKG1_interact domain-containing protein.
   
 0.968
ppp1r12a
Protein phosphatase 1, regulatory subunit 12A.
   
 0.968
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.950
LOC101154969
Protein phosphatase 1, regulatory (inhibitor) subunit 14Aa.
    
 0.950
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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