Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158297MCF.2 cell line derived transforming sequence b. (990 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.695
LOC101164400
Uncharacterized protein.
    
 0.695
LOC101164658
Uncharacterized protein.
    
 0.561
LOC101174454
Uncharacterized protein.
    
 0.561
LOC101155194
Uncharacterized protein.
    
 0.527
RHOB
Ras homolog family member B.
    
 0.527
LOC101173444
Uncharacterized protein.
    
 0.527
LOC101158607
Uncharacterized protein.
    
 0.527
LOC101160539
Uncharacterized protein.
    
 0.527
LOC101167618
Uncharacterized protein.
    
 0.527
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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