STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2L9J6_ORYLAC-type lectin domain-containing protein. (269 aa)    
Predicted Functional Partners:
LOC101168703
C1q domain-containing protein.
  
     0.484
ENSORLP00000038043
Uncharacterized protein.
  
     0.479
ENSORLP00000030324
Uncharacterized protein.
  
     0.478
c1qtnf2
C1q and TNF related 2.
  
     0.472
ENSORLP00000031037
Uncharacterized protein.
  
     0.468
col10a1
Collagen, type X, alpha 1b.
  
     0.468
ENSORLP00000030516
annotation not available
  
     0.467
ENSORLP00000028880
Uncharacterized protein.
  
 
  0.464
LOC101157725
Collectin subfamily member 10.
  
 
  0.456
LOC101162555
Collectin sub-family member 12.
  
 
  0.455
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.