Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dtymkDeoxythymidylate kinase (thymidylate kinase). (212 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
  
 
 0.992
LOC101175406
NME/NM23 nucleoside diphosphate kinase 4; Belongs to the NDK family.
  
 
 0.985
tk1
Thymidine kinase.
  
 
 0.982
dut
Deoxyuridine triphosphatase.
  
 
 0.980
dctd
dCMP deaminase.
    
 0.976
tk2
Thymidine kinase 2.
  
 
 0.971
nme6
Nucleoside diphosphate kinase.
    
 0.967
Ak9
Uncharacterized protein.
    
 0.963
nme3
Nucleoside diphosphate kinase.
  
 
 0.958
LOC101161287
NDK domain-containing protein; Belongs to the NDK family.
  
 
 0.958
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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