Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101169674SKI family transcriptional corepressor 1. (735 aa)    
Predicted Functional Partners:
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
      
 0.472
mier1
Mesoderm induction early response 1b, transcriptional regulator.
      
 0.469
lbh
LBH regulator of WNT signaling pathway.
      
 0.469
zfand5
Zinc finger, AN1-type domain 5a.
      
 0.469
LOC101160651
Protein inhibitor of activated STAT, 1b.
      
 0.463
cxxc4
CXXC finger 4.
      
 0.446
LOC101167482
Thyroid hormone receptor associated protein 3a.
      
 0.444
hsf4
Heat shock transcription factor 4.
      
 0.443
LOC101160104
Pre-B-cell leukemia homeobox 1b.
      
 0.429
LOC101166725
Zic family member 6.
      
 0.426
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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