Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164996Fork-head domain-containing protein. (340 aa)    
Predicted Functional Partners:
LOC100301613
Forkhead box G2.
  
  
 
0.906
LOC101165098
Zgc:153115.
    
 0.796
LOC101168823
Cysteine-serine-rich nuclear protein 1b.
      
 0.785
LOC101160265
Cysteine-serine-rich nuclear protein 1a.
      
 0.785
LOC101173151
Calponin-homology (CH) domain-containing protein.
      
 0.783
LOC101167186
Methyl CpG binding protein 2.
    
 0.696
foxn4
Forkhead box N4.
   
    0.615
dlx1
Distal-less homeobox 1a.
   
 
 0.613
dlx2
Homeobox domain-containing protein.
   
 
 0.600
trps1
Trichorhinophalangeal syndrome I.
    
 0.592
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.