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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162447Selenophosphate synthetase 2. (334 aa)    
Predicted Functional Partners:
sepsecs
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
     
 0.972
scly
Selenocysteine lyase.
    
 0.969
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
  
 
 0.925
LOC101169850
Thioredoxin reductase 3.
  
 
 0.923
sephs1
Selenophosphate synthetase 1.
  
  
 
0.901
rps24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
 
    
 0.717
MOCOS
Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
    
 0.702
mrpl58
Mitochondrial ribosomal protein L58.
     
 0.601
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
     
 0.596
PSTK
Phosphoseryl-tRNA kinase.
      
 0.558
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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