STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170278Serine protease; Belongs to the peptidase S1B family. (389 aa)    
Predicted Functional Partners:
timp-2b
Tissue inhibitor of metalloproteinase-2b.
   
 
 0.543
mmp14
ZnMc domain-containing protein.
      
 0.528
xpnpep3
X-prolyl aminopeptidase 3, mitochondrial.
      
 0.516
xpnpep1
X-prolyl aminopeptidase (aminopeptidase P) 1, soluble; Belongs to the peptidase M24B family.
      
 0.516
adam22
ADAM metallopeptidase domain 22.
      
 0.510
MMP23B
Matrix metallopeptidase 23B.
      
 0.453
LOC101161926
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
      
 0.438
LOC101171650
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
      
 0.438
LOC101165224
Uncharacterized protein.
      
 0.430
mmp15
ZnMc domain-containing protein.
      
 0.426
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.