Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
plpbpPyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6. (291 aa)    
Predicted Functional Partners:
pnpo
Pyridoxamine 5'-phosphate oxidase.
   
 
 0.890
lacc1
Laccase (multicopper oxidoreductase) domain containing 1.
  
  
 0.791
LOC101171384
Pyridoxal (pyridoxine, vitamin B6) kinase b.
  
  
 0.790
LOC101155341
Pyridoxal (pyridoxine, vitamin B6) kinase a.
  
  
 0.790
aldh7a1
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
  
  
 0.727
cars1
Cysteinyl-tRNA synthetase.
   
 
 0.724
aadat
Aminoadipate aminotransferase.
  
 
 0.722
yars1
Tyrosine--tRNA ligase.
   
 
 0.711
cars2
Cysteinyl-tRNA synthetase 2, mitochondrial.
   
 
 0.675
pipox
Pipecolic acid oxidase.
    
 0.655
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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