STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167058Hexosyltransferase. (428 aa)    
Predicted Functional Partners:
rfng
Beta-1,3-N-acetylglucosaminyltransferase.
    
 
 0.632
LOC101155324
Beta-1,3-N-acetylglucosaminyltransferase.
    
 
 0.613
lfng
Beta-1,3-N-acetylglucosaminyltransferase.
    
 
 0.512
kera
Keratocan.
     
 0.509
alg8
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.498
Fzd8
Frizzled class receptor 8a; Belongs to the G-protein coupled receptor Fz/Smo family.
      
 0.497
ogn
Osteoglycin, paralog a.
     
  0.477
lum
Lumican.
     
 0.413
LOC101173302
Cortistatin.
   
  
 0.411
LOC101163432
Hexosyltransferase.
  
0.404
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.