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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174360Coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2. (385 aa)    
Predicted Functional Partners:
LOC101170246
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.867
LOC101160980
Zmp:0000001088; Belongs to the peptidase S1 family.
   
 0.714
tryp
Trypsinogen; Belongs to the peptidase S1 family.
   
 0.713
LOC101170788
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.711
LOC101154931
Serine protease 1; Belongs to the peptidase S1 family.
   
 0.711
LOC101161242
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.702
LOC101162676
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.702
LOC101173066
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
  0.696
edn1
Endothelin 1.
   
 
 0.537
LOC101174201
Angiotensin II receptor, type 2; Belongs to the G-protein coupled receptor 1 family.
    
 
0.521
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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