STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc4DnaJ (Hsp40) homolog, subfamily C, member 4. (235 aa)    
Predicted Functional Partners:
dnajc11
DnaJ (Hsp40) homolog, subfamily C, member 11a.
    
 
 0.667
dnajc28
DnaJ (Hsp40) homolog, subfamily C, member 28.
      
 0.624
dnajc14
DnaJ (Hsp40) homolog, subfamily C, member 14.
      
 0.606
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.601
dnajc21
DnaJ heat shock protein family (Hsp40) member C21.
   
  
 0.596
dnajc1
DnaJ (Hsp40) homolog, subfamily C, member 1.
      
 0.595
dnajc9
DnaJ (Hsp40) homolog, subfamily C, member 9.
    
 
 0.593
dnajc15
DnaJ (Hsp40) homolog, subfamily C, member 15.
      
 0.586
dnajc24
Uncharacterized protein.
    
 
 0.585
dnajc2
DnaJ (Hsp40) homolog, subfamily C, member 2.
      
 0.574
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.