STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk11ipSerine/threonine kinase 11 interacting protein. (1185 aa)    
Predicted Functional Partners:
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 
 0.590
LOC101161711
Zinc finger and BTB domain containing 48.
   
    0.584
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.560
LOC101156241
PA domain-containing protein.
   
    0.501
sppl2b
Signal peptide peptidase-like 2.
   
    0.501
impad1
Inositol monophosphatase domain containing 1.
      
 0.482
dus3l
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
      
 0.482
kyat1
Kynurenine aminotransferase 1.
      
 0.446
LOC101173380
Kynurenine aminotransferase 3.
      
 0.446
hemk1
HemK methyltransferase family member 1.
      
 0.445
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.