STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk11ipSerine/threonine kinase 11 interacting protein. (1185 aa)    
Predicted Functional Partners:
nadk2
NAD kinase 2, mitochondrial.
      
 0.748
COMTD1
Catechol-O-methyltransferase domain containing 1.
    
   0.615
nrde2
NRDE-2, necessary for RNA interference, domain containing.
   
  
 0.614
tmub2
Transmembrane and ubiquitin-like domain containing 2.
      
 0.574
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 
 0.563
dnajc14
DnaJ (Hsp40) homolog, subfamily C, member 14.
      
 0.523
dus3l
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
      
 0.519
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.516
impad1
Inositol monophosphatase domain containing 1.
      
 0.509
kyat1
Kynurenine aminotransferase 1.
      
 0.498
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.