STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161547Ras association domain family member 1. (570 aa)    
Predicted Functional Partners:
LOC101175466
Uncharacterized protein.
    
 0.689
LOC101155570
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.689
LOC101167464
Death-domain associated protein.
    
 
 0.675
rassf5
Ras association domain family member 5.
  
 
 
0.663
sav1
Salvador family WW domain containing protein 1.
    
 
 0.650
gnmt
Glycine N-methyltransferase.
      
 0.558
nprl2
NPR2 like, GATOR1 complex subunit.
      
 0.489
xpa
Xeroderma pigmentosum, complementation group A.
    
 
 0.473
rasl11b
RAS-like, family 11, member B.
    
 
 0.468
mdm2
MDM2 proto-oncogene.
   
 
 0.456
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.