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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157923Insulin-like growth factor binding protein 5a. (253 aa)    
Predicted Functional Partners:
igf2
Insulin-like growth factor 2b.
   
 0.788
igfals
Insulin-like growth factor binding protein, acid labile subunit.
   
 0.754
pappa
Pregnancy-associated plasma protein A, pappalysin 1a.
    
 0.696
LOC101169560
Transient receptor potential cation channel, subfamily V, member 6; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.690
ENSORLP00000038017
Uncharacterized protein.
   
 0.647
LOC101156783
Myristoylated alanine-rich protein kinase C substrate b.
      
 0.587
mmp14
ZnMc domain-containing protein.
    
 0.458
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
   
 0.442
eif4ebp1
Uncharacterized protein.
      
 0.435
LOC101165490
Eukaryotic translation initiation factor 4E binding protein 1.
      
 0.435
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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