Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170575Milk fat globule-EGF factor 8 protein a. (477 aa)    
Predicted Functional Partners:
itgav
Integrin, alpha V; Belongs to the integrin alpha chain family.
     
  0.905
LOC101165726
Milk fat globule-EGF factor 8 protein b.
  
  
 
0.901
ENSORLP00000034462
Uncharacterized protein; Belongs to the multicopper oxidase family.
 
  
 0.748
LOC101155535
Hephaestin-like 1b; Belongs to the multicopper oxidase family.
 
  
  0.536
matn4
Matrilin 4.
     
 0.465
LOC101170187
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.449
LOC101167620
Peripheral myelin protein 22a.
      
 0.449
ca14
Carbonic anhydrase XIV; Belongs to the alpha-carbonic anhydrase family.
      
 0.427
LOC101169804
Epithelial cell adhesion molecule.
      
 0.427
LOC101159204
Myelin basic protein a.
      
 0.426
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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