STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl32Kelch-like family member 32. (634 aa)    
Predicted Functional Partners:
mms22l
MMS22-like, DNA repair protein.
      
 0.755
zfand4
Zinc finger, AN1-type domain 4.
     
 0.654
bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
      
 0.609
trnt1
tRNA nucleotidyl transferase, CCA-adding, 1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
      
 0.607
ndufaf4
NADH:ubiquinone oxidoreductase complex assembly factor 4.
      
 0.606
fbxl4
F-box and leucine-rich repeat protein 4.
     
 0.604
Gpr63
G protein-coupled receptor 63.
      
 0.556
GPR45
G protein-coupled receptor 45.
      
 0.556
gpr19
G protein-coupled receptor 19.
      
 0.512
ufl1
UFM1-specific ligase 1.
      
 0.498
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.