STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167722Suppression of tumorigenicity 14a. (839 aa)    
Predicted Functional Partners:
spint1
Serine peptidase inhibitor, Kunitz type 1 a.
   
 0.529
LOC101175207
Serine peptidase inhibitor, Kunitz type 1 a.
   
 0.529
ENSORLP00000031792
MANSC domain-containing protein.
   
 0.529
ENSORLP00000029802
Uncharacterized protein.
   
 0.525
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.503
LOC101162593
E74-like factor 3 (ets domain transcription factor, epithelial-specific ).
      
 0.466
LOC101174360
Coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2.
    
 0.431
LOC101167884
Coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1.
    
 0.431
agt
Angiotensinogen; Belongs to the serpin family.
   
 0.416
serpinf2
SERPIN domain-containing protein; Belongs to the serpin family.
   
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.