Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trmt112tRNA methyltransferase subunit 11-2. (123 aa)    
Predicted Functional Partners:
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
    
 0.998
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
 0.996
trmt11
tRNA methyltransferase 11 homolog.
   
 0.987
mettl5
Methyltransferase like 5.
    
 
 0.984
thumpd3
THUMP domain containing 3.
    
 0.958
mettl27
Methyltransferase like 27.
   
 0.956
dimt1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.952
trmt9b
tRNA methyltransferase 9B.
   
 0.947
alkbh8
AlkB homolog 8, tRNA methyltransferase.
   
 
 0.942
trmt12
tRNA methyltransferase 12 homolog.
   
 
 0.912
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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